Are you sure about all this?
1. You can't set one wall connector to a different Operating Current than the other if they're wired to a single breaker. One will be a Slave, the other sets the max current: Here's some snippets from the manual:
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2) Setting the Wall Connector to 56 amps should not disable any safety control signaling. Do you have any links to documents supporting this?
3) I charge my 2011 Tesla Roadster using SR Can adapter from either of my Gen2 Wall Connectors. Do you believe my adapter is going something special, because Roadster was done well before the Gen 2 Wall Connector came out.
4) Do other vehicles have problems with the Gen2 Wall Connector? Obviously, almost all will use an adapter, but I suspect most of those adapters are simple without logic built-in.
I'm going to contact the fellow who made the Tesla Roadster to NACS adapters and see what information I can get out of him. He had worked pretty closely with Tesla on his adapters and should have the best knowledge.